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About MOST

Overview

• Sorting Tables
• Formula Bar
• Renaming Metabolites
• Renaming Compartments
• Visualization Overview

Installing MOST

• Requirements
• Windows
• Known Issues
• Linux
• Macintosh

File Menu

• Load SBML
• Load CSV
• Metabolites Column Selector
• Reactions Column Selector
• Add Metabolite Prompt
• Load Excel Spreadsheets
• Load from Model Collection
• Saving Files
• Save
• Save As SBML
• Save As CSV
• Clear Tables
• Exit

Analysis Menu

• FBA
• GDBB
• E-Flux2
• SPOT

Visualization Menu

• Visualize Compartment
• Show Visualization Report
• Locate Identifier Columns
• Set Edge Flux Levels
• Reset Edge Flux Levels to Default
• Visualization Frame Menus
• Save As SVG
• Save As PNG
• Find

Edit Menu

• Unused Metabolites
• Suspicious Metabolites
• Undo/Redo
• Find/Replace
• Select All
• Add Row/Column
• Unsort

Options Menu

• Select Solvers
• Set Solver Parameters
• Visualization Options
• Graph All in Database
• Scale Edge Thickness
• Ignore Water for Reaction Matching
• Show Visualization Report

Toolbar

• Save
• Copy/Paste
• Undo/Redo
• Find/Replace

Context Menus

• Table Menus
• Select Row(s)/Column(s)/Cell(s)
• Select All
• Copy/Paste
• Clear Contents
• Delete Row(s)
• Highlight Participating Reactions
• Un-Highlight Participating Reactions
• Reaction Editor
• Table Header Menus
• Delete Column
• Formula Bar Menu
• Console Menu
• Console Popout
• Tree Menu

Keyboard Shortcuts

• List of Keyboard Shortcuts

Toolbar

Toolbar with Save, Copy, Paste, Undo, Redo, and Find buttons.

Save:

See File Menu - Saving Files.

Copy/Paste:

The Paste button will be grayed out if the cell(s) selected are in a non-editable column, or an optimization results table.

Undo/Redo:

These buttons will be grayed out if there are no edits to undo or redo, or if an optimization results table is selected. Any edit will clear all redo events and the button will become grayed out. The arrows next to the buttons will each open a menu which contains all available undo or redo events respectively.

Find/Replace:

This button opens the Find/Replace dialog.